Active Genetics & Molecular Biology Pregnancy, Children & Inherited Conditions

Origins and impacts of regulatory mutations

In plain English

AI plain-English summary

Every human genome carries thousands of mutations, but only a handful actually cause disease—this research builds computational tools to find those few dangerous mutations hidden among harmless ones. The core problem is that DNA sequencing routinely turns up vast numbers of genetic changes in patients with rare disorders or cancer, and clinicians cannot tell which ones matter. For children with rare genetic diseases, the underlying mutation remains unknown in most cases. For cancer patients, a tumour may harbour thousands of mutations in overlapping patterns, making it difficult to identify which combinations drive tumour growth. If successful, this work will give clinicians a clearer signal amid the noise. For rare disease diagnosis, it could help identify the causative mutations in undiagnosed children. For cancer care, it could match patients to the most effective treatments and suggest new drug targets for under-studied tumour types. The research links academic scientists, NHS clinical staff, and industry partners, extracting new insights from existing sequencing data as well as generating fresh datasets. While the work is fundamentally curiosity-driven—aiming to understand the basic processes that generate disease-causing mutations as parents age or as tumours evolve—it is designed from the start to open new possibilities in current medical practice.

View original technical description
We study how alterations to DNA called mutations cause birth defects and cancers, based upon new computational analyses of large DNA sequencing datasets. Overall, the challenge is to find the small minority of mutations among many that affect gene functions and cause disease. Mutations in sperm, eggs or the early embryo can cause a huge range of rare genetic disorders in children, but the mutations underlying most cases are unknown. We aim to understand the processes that lead to these mutations as parents age, to find the few mutations that really matter, and help clinicians to diagnose cases. A tumour can accumulate many thousands of mutations in complex overlapping patterns, and we work to understand how combinations of mutations cooperate to drive cancer growth. This helps to match cancer patients to the most effective treatments, and may suggest new treatments in under-studied tumour types. Our work links diverse researchers, NHS clinical staff and industry in multidisciplinary research that generates important new data as well as extracting new insights from existing data. Our projects are designed to reveal fundamental new knowledge about human disease, but also to open new possibilities in current medical practice.

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Researchers

Colin Semple (Principal Investigator)

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Original classification

Intramural

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