Active Genetics & Molecular Biology Brain & Nervous System

Understanding Spinal Cord Regeneration; the role of dynamic gene expression

In plain English

AI plain-English summary

Zebrafish can regrow spinal cord neurons after injury, but humans cannot—and a researcher in Cambridge wants to know why. The problem is that mammals, including humans, form scar tissue instead of new neurons after spinal cord injury. The researcher has previously shown that during embryonic development, genes controlling neuron formation pulse on and off in dynamic waves, rather than switching simply on or off. The same genes are active during spinal cord regeneration in zebrafish, but no one knows whether the same pulsing patterns drive the process. This project will use live imaging of gene activity in genetically modified zebrafish larvae to find out. If the research succeeds, it will reveal whether dynamic gene pulsing is the mechanism that allows zebrafish to regenerate neurons. That knowledge could eventually guide attempts to reactivate similar processes in mammals. But this is fundamental science—it will not produce a treatment for spinal cord injury in the near term. Past discoveries about gene regulation in development, however, have repeatedly opened unexpected paths in regenerative medicine.

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Animals at embryonic stages are capable of reconstructing functional tissue after disruptive injuries. Extensive research in the field of regenerative medicine aims to understand the similarities between embryogenesis and regeneration programs and despite great advances in the last few decades, many aspects of the biological and molecular mechanisms remain unknown. Mammals, including humans, cannot replace lost neurons after spinal cord injury (SCI), whereas zebrafish can regenerate neurons to replace those that are lost after injury. Upon injury, neural stem cells initiate proliferation and generate new neurons in species with regenerative capacity, but in mammals, only cells that contribute to scar formation are generated. My own research has shown that during development the generation of new neurons (neurogenesis), genes are not simply on or off. Instead, the levels of some genes pulse dynamically over time, influenced by specific factors, and control whether the cells decide to stay as proliferating neural stem cell or become new neurons. It is known that the same genes are important during spinal cord regeneration (SCR) but how they work isn't known. Therefore, it is not clear whether during SCR and the generation of new neurons are also controlled by the pulses in gene activity. Elucidating the dynamic signals and mechanisms leading to successful SCR in an animal with regenerative capacity will generate important and valuable outcomes that can be tested in higher organisms. Zebrafish is a powerful, tractable and robust animal model able to achieve functional neural regeneration following SCI, characterised by de novo neurogenesis and regrowth of neuronal connections. In this proposal I will be using larvae zebrafish as an experimental model, taking advantage of its regenerative capacity and its amenability to genetic manipulation. I will use state-of-the art live imaging techniques that show gene activity in real time. I will introduce genetic changes to assess the functional importance of pulsatile gene activity when neural stem cells undertake neuronal decisions during SCR. I will investigate how changes on pulsatile gene activity can affect the genetic landscape and alter cell-fate decisions over time during SCR. Addressing the functional importance of pulsatile gene activity during cell-fate decisions in SCR, will provide insights with potential translational implications for SCI in animals with no regenerative capacity, such as mice and humans.

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Researchers

Ximena Soto (Principal Investigator)

Related Research

Grants with similar aims, by meaning.

Identification of neurogenic factors promoting spinal cord regeneration
Harnessing plasticity to repair spinal cord injury
Understanding brain regeneration in a zebrafish larval model of intracerebral haemorrhage
Epigenetic regulation of neuronal regeneration after spinal cord lesion in zebrafish
Dissecting successful spinal cord regeneration in adult zebrafish

Original classification

Fellowship

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