Completed Cells, Biochemistry & Physiology Genetics & Molecular Biology

Pre-competitive development of chemical probes for epigenetic targets: a novel paradigm.

In plain English

AI plain-English summary

A team of academic and industry researchers will create 25 small molecule chemical probes that can precisely switch off specific epigenetic proteins in cells. Epigenetics controls which genes are switched on or off without changing the DNA sequence itself. Faults in this system drive major diseases including cancer, metabolic disorders, and neurodegeneration. But researchers currently lack the tools to cleanly test which epigenetic proteins cause which effects. Existing probes are often too weak or hit multiple targets, producing muddy results. This project aims to fill that gap by engineering probes with pre-defined potency, selectivity, and cellular activity against three protein families: histone lysine demethylases, bromodomains, and tudor domains. If successful, the probes will be made freely available to the global scientific community. This could transform how labs dissect epigenetic signalling, allowing them to link specific proteins to specific disease mechanisms with confidence. Better probes mean cleaner experiments, which in turn could accelerate the discovery of drug targets for cancer, metabolic disease, and neurodegeneration. The work is applied fundamental science—it does not deliver a therapy directly, but it builds the essential toolkit that makes targeted drug discovery possible.

View original technical description
Epigenetics describes the regulation of gene expression, chromosome stability, genomic imprinting, and stem cell fate through inherited and acquired modifications of DNA, histones and proteins. Alterations in epigenetic signaling are involved in major diseases including cancer, metabolic and neurodegenerative diseases. A dissection of the molecular mechanisms of epigenetic signaling will be facilitated by the widespread availability of small molecule chemical probes, that are selective for spec ific components of the epigenetic machinery. We aim to generate 25 chemical probes of pre-defined potency, selectivity and cellular activity. They will be directed against 3 important epigenetic protein families, comprising histone lysine demethylases, Bromo and Tudor domains. These probes will be made freely available to the scientific community. The team comprises internationally leading researchers from GlaxoSmithKline (GSK), The National Chemical Genomics Centre (NCGC) and the Univers ity of Oxford. We request funding for the University of Oxford component of the effort (Structural Genomics Consortium [SGC], part of the Nuffield Dept of Medicine, Chemistry and Biochemistry departments).

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Researchers

Chas Bountra (EPMC Awardee)

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Original classification

Strategic Award - Science

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