Active Genetics & Molecular Biology Cells, Biochemistry & Physiology

RNA processing and degradation

In plain English

AI plain-English summary

Every living cell must constantly adjust which genes it switches on or off to survive a sudden temperature spike, a viral invasion, or a developmental cue—and this project will map the molecular machinery that makes those split-second decisions possible. The problem is that scientists still do not fully understand how cells manage the torrent of RNA molecules they produce, or how they rapidly dismantle and rebuild their gene-expression systems when conditions change. This gap matters because when RNA processing goes wrong, it contributes to developmental disorders, viral disease, and cancer. The researchers have already developed biochemical tools to catch RNA molecules and their protein partners in the act of being processed. They will now apply these tools—alongside computational analysis and real-time kinetic measurements—to four specific questions: how newly made RNA triggers its own termination, how cells reshuffle RNA metabolism under stress, how coronavirus hijacks host RNA systems, and what roles non-coding RNAs play in building a healthy brain. This is fundamental science. There is no immediate clinical or commercial application. But RNA biology is deeply conserved across evolution, so insights from yeast will transfer to human cells. Past work in this field has already produced mRNA vaccines and gene-silencing therapies; a clearer picture of RNA dynamics could underpin future treatments for infection, neurodegeneration, and cancer.

View original technical description
All living systems – cells or organisms – operate in and must adapt to constantly changing environments. RNA transcription, processing and assembly with protein complexes form the core of the gene expression system, but many key features remain unclear. At times, very substantial changes take place; for example, in response to sudden environmental changes, following infection or during developmental progression. To address unresolved questions in RNA biology, we developed biochemical techniques to identify key, relevant RNA-protein, RNA-RNA and protein-protein interactions. These will be improved and applied in the proposed work, supported by bioinformatics. RNA systems are highly conserved in evolution, so techniques developed in yeast can be adapted for human cells and applied to understand disease. RNA biology in a cellular context is subject to dynamic changes. Kinetic analyses will therefore be applied, particularly during changes in cell state. Specific topics: 1: How is the nascent RNA linked to transcription termination and RNA processing 2: How does RNA metabolism respond to environmental stress? 3: How is host RNA metabolism remodelled during Coronavirus infection? 4: What are the roles of ncRNAs in neuronal development? The insights generated, and the experimental and bioinformatics techniques developed, will underpin future work by many groups.

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Researchers

David Tollervey (EPMC Awardee)

Related Research

Grants with similar aims, by meaning.

The molecular machinery of RNA metabolism and riboregulation in bacteria
Investigating the role of in vivo RNA structure in RNA degradation
Role of RNA-binding proteins in the control of RNA turnover: a genome-wide approach
Evaluating the mechanisms that drive the displacement of dsRNA-binding proteins from dsRNA
The RNA-bound proteome

Original classification

Principal Research Fellowship Renewal

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