Active Infection & Immunity Cells, Biochemistry & Physiology

'Trim-Away': Targeted Degradation of Proteins & Pathogens

In plain English

AI plain-English summary

A protein called TRIM21 acts as a cellular bouncer, grabbing viruses that slip inside human cells and tagging them for destruction. The problem is that scientists do not fully understand how TRIM21 coordinates this antiviral response—specifically, how it builds the molecular “kill tags” (ubiquitin chains) that mark viruses for degradation, and how it simultaneously sounds the alarm to rally the immune system. This project aims to fill that gap by dissecting the precise machinery TRIM21 uses. The researchers will deploy their own invention, Trim-Away, a technique that can delete specific proteins from living cells, to identify which enzymes help TRIM21 assemble different types of ubiquitin chains. They will also investigate how TRIM21 boosts antigen presentation—a process that trains killer T cells to recognise infected cells—during infections with LCMV, influenza, and SARS-CoV-2. This is fundamental science. It will not produce a new drug or vaccine tomorrow. But understanding how TRIM21 naturally dismantles viruses and triggers immunity could eventually inform the design of antiviral therapies or vaccine adjuvants that mimic this potent cellular defence. Past discoveries about similar immune sensors have already led to new classes of drugs.

View original technical description
We wish to determine how the cytosolic antibody receptor and E3 ligase TRIM21 uses its potent antiviral and immune signaling activity to prevent infection by diverse viruses. We will use our newly developed protein deletion technology ‘Trim-Away’ to determine the ubiquitin machinery necessary to synthesize the diverse ubiquitin chain types that allow TRIM21 to drive proteasomal degradation of viruses and trigger innate immunity. We will build on our structural studies of TRIM21 to define the mechanism by which its pro-inflammatory signaling is regulated and how other ligases and deubiquitinases are recruited. We will exploit our recent discovery that TRIM21 promotes antigen presentation, by investigating its role in targeting antigens for proteasomal degradation and stimulating protective T cell responses during LCMV, Influenza and SARS-CoV-2 infection. Together this work will define new roles for TRIM21 in host immunity and decipher how TRIM21 uses ubiquitin to provide antiviral protection. The insight we learn from these natural mechanisms will further the development of new technologies like Trim-Away and may inform future antiviral and vaccine development.

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Researchers

Leo James (EPMC Awardee)

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Original classification

Investigator Award in Science

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