Active Genetics & Molecular Biology Infection & Immunity

RNA-directed transposable element silencing in the mammalian germline

In plain English

AI plain-English summary

Every time a mammal produces a sperm or egg cell, the cell must decide which stretches of its own DNA to silence. This project investigates how a specialised molecular system, the piRNA pathway, marks dangerous genetic parasites called transposable elements for permanent shutdown in the developing germline. The problem is that this silencing process happens in a vanishingly small number of cells and does not occur in standard lab organisms such as flies or worms, so its inner workings have remained largely unknown. The researchers have already identified the first proteins that carry out the silencing instructions delivered by piRNAs. They now aim to map the full sequence of events—from recognising a rogue genetic element to laying down a chemical methyl tag that locks it into silence. This is fundamental science: there is no immediate medical application. But errors in this silencing process are linked to infertility and to the reactivation of transposable elements in cancer cells. Understanding the mechanism could eventually explain why some people’s germlines fail, and why some tumours lose control of their own genomes.

View original technical description
In mammals, genome methylation is erased and reset during germ cell development. The PIWI-interacting (piRNA) pathway directs de novo DNA methylation of young, active transposable elements (TEs). This is a highly precise process that safeguards the genomic integrity of the germline. piRNAs tether the PIWI protein MIWI2 to nascent TE transcripts, triggering events that culminate in DNA methylation. The underlying mechanisms have remained mostly unknown because they occur in a tiny population of developing germ cells and the methylation process is not conserved in other model organisms. Our technical advances have overcome these challenges, leading to our recent discovery of the first nuclear effectors of MIWI2 function. We will harness these advances to discover the factors and mechanisms that mediate piRNA- directed TE co-transcriptional silencing, transcriptional silencing, and DNA methylation. Our recent data suggest that specific licencing steps and multi- factor authentication are required for TE methylation. We will define how constituents of the pathway work together to discover the basis of its exacting precision. In summary, our goal is to provide a mechanistic understanding of this previously intractable process that lies at the heart of mammalian germline immortality.

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Researchers

Donal O'Carroll (EPMC Awardee)

Related Research

Grants with similar aims, by meaning.

Structural and Functional Characterisation of the MIWI2 Silencing Complex
Understanding the host recognition of nonself alien DNA and initiation of epigenetic silencing
Dynamics and functions of small interfering RNAs in germline cells
Establishment of P-element silencing in Drosophila simulans dysgenic males
Transposable element-gene chimeric transcripts in neural tissues: functional impacts on gene expression and behaviour and their regulatory control across model systems

Original classification

Discovery Award

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