Active Infection & Immunity Genetics & Molecular Biology

Exploiting genetics, genomics, and immunological responses to construct novel conjugate vaccines against Salmonella Paratyphi A; an emerging global health threat

In plain English

AI plain-English summary

A second major cause of enteric fever—the bacterium *Salmonella* Paratyphi A—currently has no licensed vaccine, while its better-known relative *Salmonella* Typhi does. This fellowship aims to close that gap by building the first effective conjugate vaccines against Paratyphi A from the ground up. The problem is straightforward: Paratyphi A causes a febrile illness indistinguishable from typhoid, yet it remains poorly understood. Without a vaccine, people in endemic regions of Asia face a preventable disease that current control measures cannot stop. The researcher will first map the genetic diversity of Paratyphi A circulating today, using samples from collaborators across Asia. This reveals which surface structures are stable enough to target with a vaccine. A key obstacle is that Paratyphi A’s O-antigen—the main component of all experimental vaccines against it—can switch forms, potentially allowing the bacterium to evade immune responses. The project will uncover the mechanism behind this variation and test whether it actually helps the pathogen escape immunity. Finally, the researcher will attach a panel of newly identified immunogenic proteins to the O-antigen, creating bespoke conjugate vaccines designed to provoke a strong, lasting immune response. If successful, this work could produce a vaccine for a disease that currently has none, reducing illness and death across Asia. It is applied, targeted research with a clear practical endpoint.

View original technical description
Enteric fever is a febrile disease caused by the bacteria Salmonella Typhi and Salmonella Paratyphi A. Typhi is well studied and new conjugate vaccines will likely have a major impact on disease burden. In contrast, Paratyphi A is poorly studied and there are currently no licensed vaccines that protect against this organism. This fellowship aims to provide a better understanding of the population structure and biology of Paratyphi A, leading to the construction of novel conjugate vaccines. Firstly, through a network of collaborators in Asia, I will define the population structure of a contemporary Paratyphi A collection. Pivotal selective events will be identified using phylogenetics and genome mapping; the conservation of potential vaccine candidates will be investigated. O-antigen is a key structure in Paratyphi A and a component of all developmental Paratyphi A vaccines. However, we have observed O-antigen phase variation in Paratyphi A which may limit vaccine efficacy. I aim to identify the mechanism of Paratyphi A O-antigen variation and assess the potential role of antigenic variation in immune escape. Lastly, I have identified a panel of immunogenic Salmonella antigens. I will investigate their function in Paratyphi A and link them to O-antigen to generate novel, bespoke conjugate vaccines.

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Researchers

Stephen Baker (EPMC Awardee)

Related Research

Grants with similar aims, by meaning.

Accelerating the clinical development of a novel typhoid-paratyphoid bivalent conjugate vaccine – (VaxPaT)
Newton001 Systems Biology of Typhoid Fever
Correlate of Protection against Paratyphoid (CoP-PT)
Salmonella Typhi and antimicrobial Resistance - modelling Impact of Vaccination and antimicrobial use to control typhoid fEver (STRIVE)
Development of a S. Paratyphi A / S. Typhi bivalent vaccine through proof-of-concept (POC) in animals

Original classification

Senior Research Fellowship

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