Active Genetics & Molecular Biology Cancer

FOXA1: function and regulation of pioneer factors

In plain English

AI plain-English summary

FOXA1 is a protein that acts like a master key, unlocking specific genes that turn healthy cells into hormone-driven cancers such as breast or prostate cancer, yet scientists do not know exactly how it works or what controls it. This matters because FOXA1 is the archetypal "pioneer factor"—a specialised protein that decides which genes a cell will use to define its identity. In hormone-dependent cancers, FOXA1 helps cancer cells grow and spread, but the molecular machinery that switches FOXA1 on and off, and the specific parts of the protein required for its activity, remain largely unknown. Without this knowledge, researchers cannot design drugs that precisely target FOXA1 without disrupting other essential cellular processes. If this research succeeds, it will reveal the exact amino acids FOXA1 needs to function and identify the upstream proteins that regulate its stability. The team will also build a new method to discover pioneer factors from any cell type. This could eventually lead to more targeted cancer therapies that block FOXA1's activity in tumours while sparing healthy tissue. The work is fundamental science—it does not promise an immediate treatment—but understanding how pioneer factors work has historically opened doors to entirely new classes of drugs, such as those that disrupt protein-protein interactions in cancer cells.

View original technical description
FOXA1 is the archetypal pioneer factor in hormone-dependent cancer. Pioneer factors are thought to be specialised transcription factors that determine the target genes that define cellular identity, but little is known about how they function, what their associated proteins are for functional activity and what regulates the expression and stability of these unusual proteins. In addition, little is known about specific amino acids on these pioneer factors that are required for their transcriptional activity. This proposal will provide unparalleled insight into the biology of FOXA1. The work will take unbiased approaches to identify the residues of FOXA1 that are required for its function and to discover the upstream regulatory proteins that can influence FOXA1 protein stability and activity. In addition, we will build, validate and exploit a novel approach for discovering pioneer factors and lineage-defining transcription factors from any cell type of interest. Coupled with these discovery aims, we will explore the functional connections and protein subcomplexes that exist between well-known co-factors and enzymes that have been discovered as FOXA1-associated proteins, in order to understand the dynamics of the molecular complexes, that to date, have been studied in bulk.

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Researchers

Jason Carroll (EPMC Awardee)

Related Research

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Original classification

Discovery Award

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