Active Infection & Immunity Lungs & Breathing

Flipping the switch on fungal pH adaptation

In plain English

AI plain-English summary

Fungi that cause human disease must survive salty, alkaline conditions inside the body, and this project will investigate whether exposure to similar conditions in the environment—driven by climate change and human activity—is making them more dangerous. The problem is that scientists do not understand how environmental pressures like soil salinity and pH shifts prime fungi for infectious growth. All major human fungal pathogens rely on a specific signalling pathway, PacC/Rim, to regulate both salt tolerance and the production of virulence factors such as toxins and iron-scavenging molecules. This project will use evolutionary, molecular, chemical, and structural biology to test whether environmental pH and salinity exposures directly select for heightened infectivity in rapidly evolving *Aspergillus* species. This is primarily fundamental science. If it succeeds, it will reveal the causal link between ecological exposure and fungal disease—a gap that currently limits our ability to predict or prevent emerging fungal threats. A deeper understanding of how environmental change primes fungi for infection could eventually inform surveillance strategies or identify new targets for antifungal drugs, but the immediate value lies in clarifying a basic biological mechanism that underpins a growing global health problem.

View original technical description
In all human fungal pathogens, adaptations to shifts in pH and salinity are functionally interdependent, essential for causation of human disease, and increasingly encountered in the natural environment due to climate-mediated change and anthropogenic causes. Recent evidence suggests that ecological exposures significantly influence fungal fitness and adaptation, but establishing causality between these exposures and the development of human mycoses remains a major challenge. Viability of fungi in salty, alkaline environments is reliant upon the rapid expression of sodium/potassium efflux ATPases, that are critical for protecting against cation toxicity and maintaining membrane potential across the plasma membrane. However, PacC/Rim signalling – a dominant, broad domain regulator of relevant gene expression - also governs expression of multiple fungal virulence factors (zinc and iron acquisition, secreted proteases, toxins), and is indispensable for infectivity of all human fungal pathogens. Our over-arching hypothesis is that successful adaptation to pH shifts in the natural environment primes opportunistic fungi for infectious growth, reducing barriers to infectivity. Through an innovative combination of evolutionary, molecular, chemical, and structural biology approaches this project will investigate how pH and salinity exposures select for heightened infectivity, particularly in rapidly evolving Aspergillus species.

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Researchers

Amelia Barber (EPMC Awardee)Christopher Tate (EPMC Awardee)Elaine Bignell (EPMC Awardee)Fiona Fraser (EPMC Awardee)Sandra Catania (EPMC Awardee)Susan Wyllie (EPMC Awardee)

Related Research

Grants with similar aims, by meaning.

Spatial relationships in pH signalling in a model filamentous fungus: roles of MVB pathway and plasma membrane components
Dissection of A. fumigatus alkaline adaptation and virulence (with a view to inhibiting fungal growth in vivo)
Transcriptional Regulation of pathogenicity-determining pH adaptation in Aspergillus.
Structure-function analysis of a pH-responsive molecular switch required for fungal pathogenicity
Deciphering the Epigenetic Gene Regulatory Landscape in the Major Mould Pathogen of Human Lungs

Original classification

Biology of Fungal Adaptation

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